Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Sdc4O35988 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sdc4O35988 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Sdc4O35988 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sdc4O35988 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sdc4O35988 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.4□□□□□ -0.1
Sdc4O35988 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sdc4O35988 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc4O35988 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sdc4O35988 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.4□□□□□ -0.11
Sdc4O35988 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Sdc4O35988 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sdc4O35988 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sdc4O35988 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sdc4O35988 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.39□□□□□ -0.11
Sdc4O35988 Gm9908-201ENSMUST00000211534 448 ntBASIC14.39□□□□□ -0.11
Sdc4O35988 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Sdc4O35988 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sdc4O35988 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc4O35988 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm15240-201ENSMUST00000118156 720 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Gm13385-201ENSMUST00000121089 220 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm24420-201ENSMUST00000176676 59 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Sdc4O35988 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
Sdc4O35988 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc4O35988 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.38□□□□□ -0.11
Sdc4O35988 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms