Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.74■□□□□ 0.43
Col15a1O35206 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Gm13350-201ENSMUST00000120519 479 ntBASIC17.74■□□□□ 0.43
Col15a1O35206 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.74■□□□□ 0.43
Col15a1O35206 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col15a1O35206 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.74■□□□□ 0.43
Col15a1O35206 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col15a1O35206 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.74■□□□□ 0.43
Col15a1O35206 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Col15a1O35206 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col15a1O35206 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Col15a1O35206 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col15a1O35206 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Col15a1O35206 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
Col15a1O35206 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.73■□□□□ 0.43
Col15a1O35206 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col15a1O35206 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Gm11793-201ENSMUST00000120433 981 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Gm43133-201ENSMUST00000197472 463 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Gm43822-201ENSMUST00000200285 476 ntBASIC17.73■□□□□ 0.43
Col15a1O35206 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col15a1O35206 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.72■□□□□ 0.43
Col15a1O35206 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Col15a1O35206 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.72■□□□□ 0.43
Col15a1O35206 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.72■□□□□ 0.43
Col15a1O35206 Gm37922-201ENSMUST00000195596 455 ntBASIC17.72■□□□□ 0.43
Col15a1O35206 Gm7783-201ENSMUST00000204795 781 ntBASIC17.72■□□□□ 0.43
Col15a1O35206 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.72■□□□□ 0.43
Col15a1O35206 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col15a1O35206 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col15a1O35206 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
Col15a1O35206 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col15a1O35206 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Mir686-201ENSMUST00000102174 109 ntBASIC17.71■□□□□ 0.43
Col15a1O35206 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.71■□□□□ 0.43
Col15a1O35206 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.71■□□□□ 0.43
Col15a1O35206 Gm43758-201ENSMUST00000199500 367 ntBASIC17.71■□□□□ 0.43
Col15a1O35206 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.71■□□□□ 0.43
Col15a1O35206 Gm3961-201ENSMUST00000204425 994 ntBASIC17.71■□□□□ 0.43
Col15a1O35206 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.71■□□□□ 0.43
Col15a1O35206 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.71■□□□□ 0.43
Col15a1O35206 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.71■□□□□ 0.43
Col15a1O35206 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col15a1O35206 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col15a1O35206 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.71■□□□□ 0.43
Col15a1O35206 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col15a1O35206 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col15a1O35206 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.7■□□□□ 0.42
Col15a1O35206 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms