Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trove2O08848 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trove2O08848 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Trove2O08848 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Trove2O08848 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Gm9726-201ENSMUST00000180321 678 ntBASIC14.37□□□□□ -0.11
Trove2O08848 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.37□□□□□ -0.11
Trove2O08848 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Gm5364-201ENSMUST00000216789 889 ntBASIC14.37□□□□□ -0.11
Trove2O08848 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trove2O08848 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trove2O08848 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trove2O08848 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.36□□□□□ -0.11
Trove2O08848 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trove2O08848 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Thap2-203ENSMUST00000218989 527 ntBASIC14.36□□□□□ -0.11
Trove2O08848 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.36□□□□□ -0.11
Trove2O08848 Gm10154-201ENSMUST00000084445 354 ntBASIC14.36□□□□□ -0.11
Trove2O08848 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.36□□□□□ -0.11
Trove2O08848 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Trove2O08848 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trove2O08848 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trove2O08848 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trove2O08848 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.35□□□□□ -0.11
Trove2O08848 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trove2O08848 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trove2O08848 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trove2O08848 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms