Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Casp6O08738 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Casp6O08738 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.97□□□□□ -0.49
Casp6O08738 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Gm15678-201ENSMUST00000117573 960 ntBASIC11.97□□□□□ -0.49
Casp6O08738 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.97□□□□□ -0.49
Casp6O08738 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.97□□□□□ -0.49
Casp6O08738 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.97□□□□□ -0.49
Casp6O08738 Gm6007-201ENSMUST00000208170 823 ntBASIC11.97□□□□□ -0.49
Casp6O08738 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.97□□□□□ -0.49
Casp6O08738 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Casp6O08738 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.97□□□□□ -0.49
Casp6O08738 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Casp6O08738 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Casp6O08738 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Casp6O08738 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.96□□□□□ -0.49
Casp6O08738 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Casp6O08738 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Casp6O08738 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Gm13385-201ENSMUST00000121089 220 ntBASIC11.96□□□□□ -0.49
Casp6O08738 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Casp6O08738 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Casp6O08738 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.96□□□□□ -0.49
Casp6O08738 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Casp6O08738 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms