Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gm10275-202ENSMUST00000168697 495 ntBASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gm10275-201ENSMUST00000092620 635 ntBASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shisa8J3QNX5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shisa8J3QNX5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Gm5177-201ENSMUST00000183092 997 ntBASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms