Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm23931-201ENSMUST00000103842 109 ntBASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm43179-201ENSMUST00000198797 275 ntBASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Olfr582-201ENSMUST00000098212 960 ntBASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc1G3X9F6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.83■□□□□ 0.29
Sh3tc1G3X9F6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Gm8213-201ENSMUST00000118191 441 ntBASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc1G3X9F6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm5187-201ENSMUST00000117317 991 ntBASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm16177-201ENSMUST00000120728 718 ntBASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc1G3X9F6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gm8584-201ENSMUST00000171982 758 ntBASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gm27331-201ENSMUST00000183705 60 ntBASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Gm29705-201ENSMUST00000212598 474 ntBASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc1G3X9F6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms