Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Gm14767-201ENSMUST00000121559 586 ntBASIC13.62□□□□□ -0.23
Clip3B9EHT4 Gm27533-201ENSMUST00000183800 152 ntBASIC13.62□□□□□ -0.23
Clip3B9EHT4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.62□□□□□ -0.23
Clip3B9EHT4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.62□□□□□ -0.23
Clip3B9EHT4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip3B9EHT4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.61□□□□□ -0.23
Clip3B9EHT4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Mir8102-201ENSMUST00000184148 139 ntBASIC13.61□□□□□ -0.23
Clip3B9EHT4 Mir6977-201ENSMUST00000184960 64 ntBASIC13.61□□□□□ -0.23
Clip3B9EHT4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip3B9EHT4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.6□□□□□ -0.23
Clip3B9EHT4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Gm27631-201ENSMUST00000184163 466 ntBASIC13.6□□□□□ -0.23
Clip3B9EHT4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.6□□□□□ -0.23
Clip3B9EHT4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.6□□□□□ -0.23
Clip3B9EHT4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clip3B9EHT4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms