Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Thap2-203ENSMUST00000218989 527 ntBASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav13d-4A0A0G2JFX3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm9385-201ENSMUST00000117563 472 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm15483-201ENSMUST00000120338 456 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm5479-201ENSMUST00000160578 435 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm18195-201ENSMUST00000207604 706 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm37019-201ENSMUST00000192133 2134 ntBASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms