Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm12882-201ENSMUST00000121696 517 ntBASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Chchd1-203ENSMUST00000224633 557 ntBASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm25287-201ENSMUST00000103846 110 ntBASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm22918-201ENSMUST00000103855 110 ntBASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm13823-201ENSMUST00000119930 345 ntBASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms