Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm15467-201ENSMUST00000120582 445 ntBASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav6n-6A0A075B6B2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav6n-6A0A075B6B2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms