Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb3S4R1G7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gm38225-201ENSMUST00000194001 393 ntBASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gm18057-201ENSMUST00000208220 503 ntBASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms