Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm29608-201ENSMUST00000190444 463 ntBASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm38241-201ENSMUST00000192641 898 ntBASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm43822-201ENSMUST00000200285 476 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm3961-201ENSMUST00000204425 994 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Snora73a-201ENSMUST00000082453 205 ntBASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac6Q9Z2V5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Gm17330-201ENSMUST00000221047 165 ntBASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac6Q9Z2V5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Gm7584-201ENSMUST00000175829 940 ntBASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Gm27243-201ENSMUST00000183964 521 ntBASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Gm26315-201ENSMUST00000083890 321 ntBASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac6Q9Z2V5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms