Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gm21896-201ENSMUST00000186520 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21873-201ENSMUST00000186728 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21794-201ENSMUST00000187056 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21880-201ENSMUST00000187275 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21826-201ENSMUST00000187451 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21198-201ENSMUST00000188393 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21749-201ENSMUST00000189343 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21901-201ENSMUST00000189568 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm29424-201ENSMUST00000189716 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm28599-201ENSMUST00000189838 694 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21867-201ENSMUST00000189917 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm29269-201ENSMUST00000190087 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21722-201ENSMUST00000190153 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm28423-201ENSMUST00000190701 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21899-201ENSMUST00000190745 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21910-201ENSMUST00000191163 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21849-201ENSMUST00000191571 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm28678-201ENSMUST00000191593 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm20910-201ENSMUST00000193268 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21871-201ENSMUST00000194621 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn13Q9Z0S4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Gm13223-201ENSMUST00000118609 747 ntBASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Gm10275-202ENSMUST00000168697 495 ntBASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Gm10275-201ENSMUST00000092620 635 ntBASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn13Q9Z0S4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Gm9719-201ENSMUST00000162765 543 ntBASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Gm17837-201ENSMUST00000186435 985 ntBASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn13Q9Z0S4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms