Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gm12644-201ENSMUST00000119935 606 ntBASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn5Q9WU28 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn5Q9WU28 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn5Q9WU28 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms