Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtp4Q9ER80 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rtp4Q9ER80 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rtp4Q9ER80 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rtp4Q9ER80 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm6222-201ENSMUST00000120787 396 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm5745-201ENSMUST00000183748 313 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm27631-201ENSMUST00000184163 466 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm37230-201ENSMUST00000194491 818 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Olfr286-202ENSMUST00000205305 969 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gm44855-201ENSMUST00000205725 362 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtp4Q9ER80 Syt7-204ENSMUST00000223586 1344 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm14042-201ENSMUST00000120139 833 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm27838-201ENSMUST00000184829 128 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Gm16476-201ENSMUST00000221544 139 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Dupd1-202ENSMUST00000224735 548 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtp4Q9ER80 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Syt7-205ENSMUST00000224135 1557 ntBASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtp4Q9ER80 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms