Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm12176-201ENSMUST00000121420 875 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm27320-201ENSMUST00000184892 109 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm29396-201ENSMUST00000185659 716 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Gm10608-202ENSMUST00000213924 676 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Snora73a-201ENSMUST00000082453 205 ntBASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-4Q9EQM3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-4Q9EQM3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms