Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps33aQ9D2N9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps33aQ9D2N9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Gm33142-201ENSMUST00000193913 867 ntBASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps33aQ9D2N9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps33aQ9D2N9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.83□□□□□ -0.03
Vps33aQ9D2N9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps33aQ9D2N9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps33aQ9D2N9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms