Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim42Q9D2H5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm25990-201ENSMUST00000102440 86 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm9103-201ENSMUST00000119371 405 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm18669-201ENSMUST00000216049 778 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim42Q9D2H5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim42Q9D2H5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Gm25925-201ENSMUST00000158314 306 ntBASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms