Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Gm19863-201ENSMUST00000192480 2218 ntBASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Gm38327-201ENSMUST00000195852 1755 ntBASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Mrpl55Q9CZ83 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms