Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gm18206-201ENSMUST00000207027 926 ntBASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssr1Q9CY50 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gm27920-201ENSMUST00000183953 96 ntBASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssr1Q9CY50 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssr1Q9CY50 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms