Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn1Q9CWM4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pfdn1Q9CWM4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn1Q9CWM4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm37179-201ENSMUST00000194862 823 ntBASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn1Q9CWM4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms