Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm8097-201ENSMUST00000117903 829 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm13836-201ENSMUST00000121159 501 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm27867-201ENSMUST00000184778 125 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 AL672049.1-201ENSMUST00000197943 91 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 AC151836.1-202ENSMUST00000226259 753 ntBASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39lQ9CQD0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms