Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ska1Q9CPV1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.25□□□□□ -0.29
Ska1Q9CPV1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Gm9727-201ENSMUST00000161387 555 ntBASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Mir8117-201ENSMUST00000184773 107 ntBASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska1Q9CPV1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Gm5364-201ENSMUST00000216789 889 ntBASIC13.24□□□□□ -0.29
Ska1Q9CPV1 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska1Q9CPV1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ska1Q9CPV1 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms