Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm14140-201ENSMUST00000119999 995 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm10275-202ENSMUST00000168697 495 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Gm10275-201ENSMUST00000092620 635 ntBASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim8Q99PJ2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm11779-201ENSMUST00000118541 368 ntBASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm11594-201ENSMUST00000122313 162 ntBASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm27920-201ENSMUST00000183953 96 ntBASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim8Q99PJ2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms