Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gm8738-201ENSMUST00000172606 329 ntBASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gm32025-201ENSMUST00000217960 307 ntBASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Gm8885-201ENSMUST00000189382 598 ntBASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Gm44967-201ENSMUST00000207047 631 ntBASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh15Q99PJ1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh15Q99PJ1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm11978-201ENSMUST00000122315 466 ntBASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm15276-201ENSMUST00000145953 498 ntBASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm31256-201ENSMUST00000194705 506 ntBASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms