Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm13453-201ENSMUST00000118708 357 ntBASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm44845-201ENSMUST00000208773 335 ntBASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 CT030194.1-201ENSMUST00000225507 532 ntBASIC18.15■□□□□ 0.5
Rtn4Q99P72 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn4Q99P72 Gm5422-201ENSMUST00000050717 2721 ntBASIC18.14■□□□□ 0.5
Rtn4Q99P72 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn4Q99P72 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn4Q99P72 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm16044-201ENSMUST00000118475 450 ntBASIC18.14■□□□□ 0.49
Rtn4Q99P72 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm17983-201ENSMUST00000190766 594 ntBASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm38280-201ENSMUST00000192610 158 ntBASIC18.14■□□□□ 0.49
Rtn4Q99P72 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4Q99P72 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm5479-201ENSMUST00000160578 435 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm8185-201ENSMUST00000160999 669 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm43787-201ENSMUST00000197792 1037 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm42588-201ENSMUST00000200538 1297 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 AC154441.1-201ENSMUST00000223653 1006 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Gm20445-201ENSMUST00000061905 565 ntBASIC18.13■□□□□ 0.49
Rtn4Q99P72 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4Q99P72 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4Q99P72 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms