Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Gm27741-201ENSMUST00000185060 237 ntBASIC13.22□□□□□ -0.29
Nkd1Q99MH6 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Matn2-206ENSMUST00000228570 2798 ntBASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd1Q99MH6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Mir3113-201ENSMUST00000175478 76 ntBASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.21□□□□□ -0.29
Nkd1Q99MH6 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd1Q99MH6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkd1Q99MH6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.2□□□□□ -0.3
Nkd1Q99MH6 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms