Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tlr3Q99MB1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.06■□□□□ 0
Tlr3Q99MB1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.06■□□□□ 0
Tlr3Q99MB1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Gm27306-201ENSMUST00000183970 107 ntBASIC15.06■□□□□ 0
Tlr3Q99MB1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.06■□□□□ 0
Tlr3Q99MB1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tlr3Q99MB1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tlr3Q99MB1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tlr3Q99MB1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tlr3Q99MB1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Tlr3Q99MB1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tlr3Q99MB1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tlr3Q99MB1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tlr3Q99MB1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Mir7684-201ENSMUST00000183858 60 ntBASIC15.05■□□□□ -0
Tlr3Q99MB1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Gm6888-201ENSMUST00000221983 706 ntBASIC15.05■□□□□ -0
Tlr3Q99MB1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.05■□□□□ -0
Tlr3Q99MB1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tlr3Q99MB1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tlr3Q99MB1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.04■□□□□ -0
Tlr3Q99MB1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.04■□□□□ -0
Tlr3Q99MB1 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.04■□□□□ -0
Tlr3Q99MB1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tlr3Q99MB1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tlr3Q99MB1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tlr3Q99MB1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.03■□□□□ -0
Tlr3Q99MB1 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.03■□□□□ -0
Tlr3Q99MB1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tlr3Q99MB1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.03■□□□□ -0
Tlr3Q99MB1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tlr3Q99MB1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tlr3Q99MB1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms