Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm12742-201ENSMUST00000117326 410 ntBASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm12957-201ENSMUST00000117835 377 ntBASIC12.31□□□□□ -0.44
Scrt1Q99M85 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Mir125a-201ENSMUST00000083545 68 ntBASIC12.3□□□□□ -0.44
Scrt1Q99M85 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.3□□□□□ -0.44
Scrt1Q99M85 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scrt1Q99M85 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Gm28911-201ENSMUST00000188837 117 ntBASIC12.29□□□□□ -0.44
Scrt1Q99M85 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Gm45331-201ENSMUST00000209868 554 ntBASIC12.29□□□□□ -0.44
Scrt1Q99M85 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.29□□□□□ -0.44
Scrt1Q99M85 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms