Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd3Q99LE3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lysmd3Q99LE3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd3Q99LE3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lysmd3Q99LE3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms