Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Gm18827-201ENSMUST00000188341 790 ntBASIC14□□□□□ -0.17
Cstf1Q99LC2 Gm4959-201ENSMUST00000197271 1044 ntBASIC14□□□□□ -0.17
Cstf1Q99LC2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14□□□□□ -0.17
Cstf1Q99LC2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Gm10275-202ENSMUST00000168697 495 ntBASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Gm10275-201ENSMUST00000092620 635 ntBASIC13.99□□□□□ -0.17
Cstf1Q99LC2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf1Q99LC2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Gm5370-201ENSMUST00000187187 574 ntBASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Gm29127-201ENSMUST00000188304 517 ntBASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf1Q99LC2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Gm40466-201ENSMUST00000212174 422 ntBASIC13.97□□□□□ -0.17
Cstf1Q99LC2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms