Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd1Q99J36 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm13597-201ENSMUST00000121239 375 ntBASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm2445-201ENSMUST00000182798 989 ntBASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm27301-201ENSMUST00000184012 127 ntBASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Thumpd1Q99J36 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thumpd1Q99J36 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thumpd1Q99J36 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms