Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Gm10275-201ENSMUST00000092620 635 ntBASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga3Q91XY5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhga3Q91XY5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Gm6736-201ENSMUST00000166583 948 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Mir6990-201ENSMUST00000183724 91 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Gm37935-201ENSMUST00000192012 982 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga3Q91XY5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhga3Q91XY5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms