Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tram1Q91V04 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Grk6-205ENSMUST00000224653 2976 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tram1Q91V04 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.06□□□□□ -0.48
Tram1Q91V04 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tram1Q91V04 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
Tram1Q91V04 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Tram1Q91V04 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tram1Q91V04 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.05□□□□□ -0.48
Tram1Q91V04 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tram1Q91V04 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms