Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.68□□□□□ -0.22
Q8VDP2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.68□□□□□ -0.22
Q8VDP2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.68□□□□□ -0.22
Q8VDP2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Q8VDP2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Q8VDP2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Q8VDP2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.68□□□□□ -0.22
Q8VDP2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Q8VDP2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.68□□□□□ -0.22
Q8VDP2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q8VDP2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.68□□□□□ -0.22
Q8VDP2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Q8VDP2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Q8VDP2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Gm37722-201ENSMUST00000193757 208 ntBASIC13.67□□□□□ -0.22
Q8VDP2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.67□□□□□ -0.22
Q8VDP2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Q8VDP2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q8VDP2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Q8VDP2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.66□□□□□ -0.22
Q8VDP2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.66□□□□□ -0.22
Q8VDP2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.66□□□□□ -0.22
Q8VDP2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Q8VDP2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Q8VDP2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Q8VDP2 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.65□□□□□ -0.22
Q8VDP2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.65□□□□□ -0.22
Q8VDP2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Q8VDP2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q8VDP2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms