Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm1Q8VC85 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm27525-201ENSMUST00000184465 107 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm5264-201ENSMUST00000190584 848 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 AW822252-206ENSMUST00000208904 237 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Acot6-202ENSMUST00000222921 3622 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm1Q8VC85 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm18889-201ENSMUST00000174284 929 ntBASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm2445-201ENSMUST00000182798 989 ntBASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm27494-201ENSMUST00000184735 189 ntBASIC13.44□□□□□ -0.26
Lsm1Q8VC85 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.44□□□□□ -0.26
Lsm1Q8VC85 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm1Q8VC85 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms