Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc9Q8VC31 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc9Q8VC31 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gm13312-201ENSMUST00000119631 718 ntBASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gm33142-201ENSMUST00000193913 867 ntBASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc9Q8VC31 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Ccdc9Q8VC31 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc9Q8VC31 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc9Q8VC31 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc9Q8VC31 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Gm27742-201ENSMUST00000184667 60 ntBASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms