Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm27847-201ENSMUST00000183711 107 ntBASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm27375-201ENSMUST00000183799 107 ntBASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm6007-201ENSMUST00000208170 823 ntBASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Mir698-201ENSMUST00000102164 109 ntBASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Gm45784-201ENSMUST00000188360 142 ntBASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Gm7561-201ENSMUST00000211203 886 ntBASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp7Q8R1T1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm38223-201ENSMUST00000194484 695 ntBASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm38671-201ENSMUST00000200573 130 ntBASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Gm6091-201ENSMUST00000098307 165 ntBASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp7Q8R1T1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Gm44397-201ENSMUST00000195950 113 ntBASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp7Q8R1T1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp7Q8R1T1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp7Q8R1T1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms