Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm4986-201ENSMUST00000119731 549 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm15782-201ENSMUST00000121073 445 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm37922-201ENSMUST00000195596 455 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm44487-201ENSMUST00000205145 325 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm9445-201ENSMUST00000207454 1285 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx54Q8K4L0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gm37986-201ENSMUST00000193285 383 ntBASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx54Q8K4L0 Gm3756-201ENSMUST00000169182 1355 ntBASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Gm43579-201ENSMUST00000202387 1307 ntBASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 240.1 ms