Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Gm27631-201ENSMUST00000184163 466 ntBASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cchcr1Q8K2I2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cchcr1Q8K2I2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cchcr1Q8K2I2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cchcr1Q8K2I2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cchcr1Q8K2I2 Matn2-206ENSMUST00000228570 2798 ntBASIC16.58■□□□□ 0.25
Cchcr1Q8K2I2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Mir6990-201ENSMUST00000183724 91 ntBASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Gm43514-201ENSMUST00000198852 424 ntBASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cchcr1Q8K2I2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm2445-201ENSMUST00000182798 989 ntBASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Mir125a-201ENSMUST00000083545 68 ntBASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms