Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm27430-201ENSMUST00000184585 107 ntBASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gm44333-201ENSMUST00000197168 107 ntBASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gm5779-201ENSMUST00000218467 910 ntBASIC14.17□□□□□ -0.14
Clip4Q8CI96 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.16□□□□□ -0.14
Clip4Q8CI96 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
Clip4Q8CI96 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Gm22175-201ENSMUST00000175007 78 ntBASIC14.16□□□□□ -0.14
Clip4Q8CI96 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.16□□□□□ -0.14
Clip4Q8CI96 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip4Q8CI96 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm2451-201ENSMUST00000199447 999 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm10290-201ENSMUST00000200451 999 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm45098-201ENSMUST00000207179 657 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Gm18049-201ENSMUST00000208909 581 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.15□□□□□ -0.14
Clip4Q8CI96 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clip4Q8CI96 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Clip4Q8CI96 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.15□□□□□ -0.15
Clip4Q8CI96 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
Clip4Q8CI96 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.14□□□□□ -0.15
Clip4Q8CI96 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gm13015-201ENSMUST00000118674 204 ntBASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gm9726-201ENSMUST00000180321 678 ntBASIC14.14□□□□□ -0.15
Clip4Q8CI96 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.14□□□□□ -0.15
Clip4Q8CI96 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms