Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rp1l1Q8CGM2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm14028-201ENSMUST00000117434 479 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Mir6979-201ENSMUST00000183927 56 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Mir6927-201ENSMUST00000184494 71 ntBASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.25□□□□□ -0.13
Rp1l1Q8CGM2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rp1l1Q8CGM2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm7857-201ENSMUST00000117957 358 ntBASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm12217-201ENSMUST00000118858 696 ntBASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rp1l1Q8CGM2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms