Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Smc5Q8CG46 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc5Q8CG46 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc5Q8CG46 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc5Q8CG46 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc5Q8CG46 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm12260-201ENSMUST00000122447 411 ntBASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm27631-201ENSMUST00000184163 466 ntBASIC17.33■□□□□ 0.36
Smc5Q8CG46 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.33■□□□□ 0.36
Smc5Q8CG46 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc5Q8CG46 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.32■□□□□ 0.36
Smc5Q8CG46 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Gm11745-201ENSMUST00000121669 448 ntBASIC17.32■□□□□ 0.36
Smc5Q8CG46 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Gm45453-201ENSMUST00000211758 853 ntBASIC17.32■□□□□ 0.36
Smc5Q8CG46 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smc5Q8CG46 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 AA543401-201ENSMUST00000164248 1269 ntBASIC17.31■□□□□ 0.36
Smc5Q8CG46 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.31■□□□□ 0.36
Smc5Q8CG46 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc5Q8CG46 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Gm17271-201ENSMUST00000165535 355 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms