Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Gm45612-201ENSMUST00000211320 160 ntBASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc87Q8CDL9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc87Q8CDL9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc87Q8CDL9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms