Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf31Q8CCF0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm11424-201ENSMUST00000121929 829 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm12134-201ENSMUST00000122109 520 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Gm28631-201ENSMUST00000190740 334 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf31Q8CCF0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf31Q8CCF0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf31Q8CCF0 Gm5425-201ENSMUST00000214125 459 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms