Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp44Q8C2S0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Gm15321-201ENSMUST00000121290 288 ntBASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp44Q8C2S0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp44Q8C2S0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms