Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.21□□□□□ -0.29
Ska3Q8C263 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.21□□□□□ -0.29
Ska3Q8C263 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ska3Q8C263 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ska3Q8C263 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ska3Q8C263 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ska3Q8C263 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Ska3Q8C263 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ska3Q8C263 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.21□□□□□ -0.3
Ska3Q8C263 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.21□□□□□ -0.3
Ska3Q8C263 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ska3Q8C263 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ska3Q8C263 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.2□□□□□ -0.3
Ska3Q8C263 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm46209-201ENSMUST00000217912 553 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Gm9229-201ENSMUST00000222777 126 ntBASIC13.2□□□□□ -0.3
Ska3Q8C263 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska3Q8C263 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska3Q8C263 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.19□□□□□ -0.3
Ska3Q8C263 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Gm6916-202ENSMUST00000205523 195 ntBASIC13.19□□□□□ -0.3
Ska3Q8C263 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.19□□□□□ -0.3
Ska3Q8C263 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.19□□□□□ -0.3
Ska3Q8C263 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.19□□□□□ -0.3
Ska3Q8C263 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ska3Q8C263 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska3Q8C263 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms