Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm38000-201ENSMUST00000192390 1215 ntBASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc6bQ8BKI2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Gm7046-201ENSMUST00000221351 977 ntBASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6bQ8BKI2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Gm11978-201ENSMUST00000122315 466 ntBASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Gm7809-201ENSMUST00000153199 742 ntBASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Gm6621-201ENSMUST00000193251 772 ntBASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6bQ8BKI2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Gm12363-201ENSMUST00000122250 668 ntBASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Gm44364-201ENSMUST00000198368 141 ntBASIC18.16■□□□□ 0.5
Tnrc6bQ8BKI2 Cts7-204ENSMUST00000225321 1257 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms