Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc5a7Q8BGY9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Slc5a7Q8BGY9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc5a7Q8BGY9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.29□□□□□ -0.44
Slc5a7Q8BGY9 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm10275-202ENSMUST00000168697 495 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm45098-201ENSMUST00000207179 657 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm10275-201ENSMUST00000092620 635 ntBASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc5a7Q8BGY9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc5a7Q8BGY9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm11764-201ENSMUST00000120221 623 ntBASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm45167-201ENSMUST00000208007 322 ntBASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc5a7Q8BGY9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc5a7Q8BGY9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms