Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm14767-201ENSMUST00000121559 586 ntBASIC13.85□□□□□ -0.19
Ubp1Q811S7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm45925-201ENSMUST00000218882 744 ntBASIC13.85□□□□□ -0.19
Ubp1Q811S7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubp1Q811S7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.84□□□□□ -0.19
Ubp1Q811S7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gm10576-201ENSMUST00000191927 825 ntBASIC13.84□□□□□ -0.19
Ubp1Q811S7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubp1Q811S7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.84□□□□□ -0.19
Ubp1Q811S7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.84□□□□□ -0.19
Ubp1Q811S7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubp1Q811S7 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubp1Q811S7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gm15653-201ENSMUST00000119247 907 ntBASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.83□□□□□ -0.2
Ubp1Q811S7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms